dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003949_17|CGC1
Gene ID: MGYG000003949_01489
Location and strand information: 26847 - 27527 (+)
Family: 3.A.1.122.6
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein YknY

Gene clsuter ID: MGYG000003949_17|CGC1
Gene ID: MGYG000003949_01490
Location and strand information: 27511 - 28521 (+)
Family: 3.A.1.122.14
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Gene clsuter ID: MGYG000003949_17|CGC1
Gene ID: MGYG000003949_01491
Location and strand information: 28487 - 28585 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003949_17|CGC1
Gene ID: MGYG000003949_01492
Location and strand information: 28582 - 29445 (+)
Family: CE4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 10.3098
Protein molecular weight: 32264.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003949_17|CGC1
Gene ID: MGYG000003949_01493
Location and strand information: 29552 - 30958 (+)
Family: null
Protein type: null
Protein description: Uronate isomerase

Gene clsuter ID: MGYG000003949_17|CGC1
Gene ID: MGYG000003949_01494
Location and strand information: 30986 - 33820 (+)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7629
Protein molecular weight: 107300.8
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003949_17|CGC1
Gene ID: MGYG000003949_01495
Location and strand information: 33839 - 35176 (+)
Family: GH10|CBM9|CBM22
Protein type: CAZyme
Protein description: Endo-1,4-beta-xylanase Y
Protein isoelectric point: 5.0922
Protein molecular weight: 50659.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003949_17|CGC1
Gene ID: MGYG000003949_01496
Location and strand information: 35198 - 36268 (+)
Family: 3.A.1.11.8
Protein type: TC
Protein description: Spermidine/putrescine import ATP-binding protein PotA

Gene clsuter ID: MGYG000003949_17|CGC1
Gene ID: MGYG000003949_01497
Location and strand information: 36261 - 37088 (+)
Family: 3.A.1.11.8
Protein type: TC
Protein description: Spermidine/putrescine transport system permease protein PotB

Gene clsuter ID: MGYG000003949_17|CGC1
Gene ID: MGYG000003949_01498
Location and strand information: 37082 - 37870 (+)
Family: 3.A.1.11.7
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003949_17|CGC1
Gene ID: MGYG000003949_01499
Location and strand information: 37867 - 38949 (+)
Family: 3.A.1.11.7
Protein type: TC
Protein description: Spermidine/putrescine-binding periplasmic protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003949_01489	putative ABC transporter ATP-binding protein YknY	TC	26847	27527	+	3.A.1.122.6
MGYG000003949_01490	Vitamin B12 import ATP-binding protein BtuD	TC	27511	28521	+	3.A.1.122.14
MGYG000003949_01491	hypothetical protein	null	28487	28585	+	No domain
MGYG000003949_01492	hypothetical protein	CAZyme	28582	29445	+	CE4
MGYG000003949_01493	Uronate isomerase	null	29552	30958	+	UxaC
MGYG000003949_01494	hypothetical protein	CAZyme	30986	33820	+	GH115
MGYG000003949_01495	Endo-1,4-beta-xylanase Y	CAZyme	33839	35176	+	GH10\| CBM9\| CBM22
MGYG000003949_01496	Spermidine/putrescine import ATP-binding protein PotA	TC	35198	36268	+	3.A.1.11.8
MGYG000003949_01497	Spermidine/putrescine transport system permease protein PotB	TC	36261	37088	+	3.A.1.11.8
MGYG000003949_01498	hypothetical protein	TC	37082	37870	+	3.A.1.11.7
MGYG000003949_01499	Spermidine/putrescine-binding periplasmic protein	TC	37867	38949	+	3.A.1.11.7
Protein ID	Protein Name	Type	Start	End	Strand	Signature